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Citing CMDGA
Clear Filters
Annotation type
1642
candidate regulatory elements
1202
target gene predictions
923
chromatin state
883
accessible chromatin
860
histone modifications
814
binding sites
593
gene expression
167
differential activity
165
eQTL
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
4
variant to gene
3
pQTL
2
other
2
sQTL
1
representative DNase hypersensitivity sites
Annotation Category
2
Genetic variant effects
Annotation type Category
2
RNA-seq
1
Expression arrays
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
islet of Langerhans
Organ
2
pancreas
Life stage
1
adult
Date released
May, 2021
1
August, 2021
1
March, 2023
Software used
1
matrix-eQTL
1
qTLtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
placenta
month_released!
May, 2021
Showing 2 of 2 results
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Download
FileSet
DSR615JGJ
released
Annotation file set
: Lead variant-to-phenotype associations identified using permutations. Contains data for all phenotypes (eGene/Junction) with an sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR276ICN
released
Annotation file set
: sQTL annotation of islet of Langerhans from PMID:25201977
Lab:
AMP-T2D consortium
Project:
AMP