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Schema
Citing CMDGA
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Annotation type
4
candidate regulatory elements
3
accessible chromatin
3
chromatin state
3
target gene predictions
1
gene expression
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
DNase-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
10
kidney
3
glomerular visceral epithelial cell
2
glomerular endothelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
renal cortical epithelial cell
2
renal pelvis
1
ACHN
1
Caki2
1
HEK293
1
RCC 7860
1
cortex of kidney
1
epithelial cell of proximal tubule
1
glomerular epithelium
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
left renal cortex interstitium
1
left renal pelvis
1
metanephros
1
parietal epithelial cell
1
renal cell carcinoma
1
renal cortex interstitium
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
ureteric bud
Organ
3
epithelium
3
kidney
1
blood vessel
1
vasculature
0
ureter
Life stage
1
adult
1
fetal
Date released
2
January, 2020
1
June, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
placenta
Showing 3 of 3 results
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Download
FileSet
DSR079ZYZ
released
Annotation file set
: Accessible chromatin annotation for Kidney Kidney tubule cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR393WXW
released
Annotation file set
: Accessible chromatin annotation of kidney tubule cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR479BAK
released
Annotation file set
: Accessible chromatin annotation of kidney capillary endothelial cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP