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Citing CMDGA
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Annotation type
9
candidate regulatory elements
5
target gene predictions
4
chromatin state
2
accessible chromatin
2
binding sites
2
histone modifications
Annotation Category
5
Target gene links
Annotation type Category
5
DNase-seq
4
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
2
cell line
Biosample term
19
A549
17
lung
13
left lung
11
right lung
4
fibroblast of lung
3
upper lobe of left lung
2
IMR-90
2
PC-9
2
type II pneumocyte
1
NCI-H226 cell
1
NCI-H460 cell
1
WI38
1
lung microvascular endothelial cell
1
type I pneumocyte
Disease term
1
lung adenocarcinoma
Organ
5
lung
Life stage
3
adult
1
unknown
Date released
4
September, 2022
1
May, 2021
Software used
4
r
1
abc
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
organ_slims!
skeleton
Showing 5 of 5 results
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FileSet
DSR334STP
released
Annotation file set
: Target gene predictions for BSS01871 upper lobe of left lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR505TRN
released
Annotation file set
: Target gene predictions for BSS01870 upper lobe of left lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR244BFG
released
Annotation file set
: Target gene predictions for BSS01869 upper lobe of left lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR808UQF
released
Annotation file set
: Target gene predictions for BSS01415 PC-9 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR988JBC
released
Annotation file set
: enhancer-gene predicton of PC-9-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP