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Citing CMDGA
Clear Filters
Annotation type
12
binding sites
7
accessible chromatin
5
histone modifications
5
target gene predictions
4
candidate regulatory elements
3
chromatin state
1
variant allelic effects
Annotation Category
5
Target gene links
Annotation type Category
3
ATAC-seq
2
ChIP-seq
2
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
1
fibroblast of mammary gland
Organ
96
epithelium
78
embryo
66
kidney
56
musculature of body
52
uterus
50
lung
49
connective tissue
40
intestine
34
blood
34
bodily fluid
34
heart
34
limb
33
brain
33
extraembryonic component
skin of body
21
large intestine
21
pancreas
19
stomach
16
placenta
16
small intestine
16
vasculature
13
adrenal gland
13
thymus
13
ureter
10
blood vessel
10
penis
9
bone element
9
eye
8
liver
8
spinal cord
5
gonad
5
mammary gland
4
esophagus
4
lymph node
4
prostate gland
3
bone marrow
3
bronchus
3
lymphatic vessel
3
lymphoid tissue
3
mouth
3
ovary
3
skeleton
3
spleen
3
vein
2
adipose tissue
2
artery
2
testis
2
tongue
2
urinary bladder
1
thyroid gland
Life stage
adult
2
unknown
Date released
3
November, 2021
May, 2021
2
September, 2022
Software used
3
abc
2
r
Lab
3
Bing Ren, UCSD
2
AMP-T2D consortium
Project
3
ENCODE
2
AMP
RFA
3
ENCODE3
2
AMP
organ_slims!
skin of body
month_released!
May, 2021
relevant_life_stage!
adult
Showing 5 of 5 results
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Download
FileSet
DSR947KWU
released
Annotation file set
: Target gene predictions for BSS01209 mammary gland epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR802BSP
released
Annotation file set
: Target gene predictions for BSS00343 fibroblast of mammary gland from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154LWM
released
Annotation file set
: Target gene predictions of Mammary Luminal Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR114GRY
released
Annotation file set
: Target gene predictions of Mammary Luminal Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR990AWB
released
Annotation file set
: Target gene predictions of Mammary Epithelial from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE