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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
81
kidney
42
right kidney
40
renal cortex interstitium
40
renal pelvis
36
left kidney
12
left renal cortex interstitium
12
left renal pelvis
12
right renal pelvis
11
right renal cortex interstitium
9
HEK293
7
kidney interstitial cell
5
ACHN
5
Caki2
5
RCC 7860
5
Renin-positive Juxtaglomerular Granular Cell
5
renal cell carcinoma
4
G401
4
cortex of kidney
3
HEK293T
3
kidney cell
3
kidney resident macrophage
2
metanephros
1
left kidney
1
RCC
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
kidney - cortex
1
kidney - medulla
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
Organ
4
kidney
Life stage
3
child
1
young adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
skin of body
epithelium
Showing 4 of 4 results
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Download
FileSet
DSR225JEJ
released
Annotation file set
: Candidate regulatory elements for BSS00372 G401 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR131OKK
released
Annotation file set
: Target gene predictions for BSS00372 G401 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR437DYO
released
Annotation file set
: Chromatin states for BSS00372 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR093VBX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE G401
Lab:
AMP-T2D consortium
Project:
AMP