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Citing CMDGA
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Annotation type
1655
candidate regulatory elements
1348
target gene predictions
977
histone modifications
936
chromatin state
911
accessible chromatin
815
binding sites
682
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
71
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
3
variant to gene
1
representative DNase hypersensitivity sites
Annotation Category
3
Genetic variant effects
Annotation type Category
3
quantitative proteomics
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
2
cartilage tissue
1
cerebrospinal fluid
Organ
2
connective tissue
1
bodily fluid
Life stage
3
adult
Date released
3
August, 2021
Software used
2
fastqtl
2
peer
1
r
Lab
2
ITG
1
AMP-T2D consortium
Project
2
ITG
1
AMP
RFA
2
ITG
1
AMP
organ_slims!
spinal cord
month_released!
August, 2022
Showing 3 of 3 results
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FileSet
DSR561OLH
released
Annotation file set
: pQTLs from CSF levels of 1,126 proteins in 133 subjects by performing a genome-wide association analysis of 514,227 SNPs
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR524ZAH
released
Annotation file set
: pQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR651XSZ
released
Annotation file set
: pQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG