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Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
Annotation Category
1
cis-regulatory elements
Annotation type Category
3
snATAC-seq
2
ChIP-seq
1
DNase-seq
1
RNA-seq
1
pCHi-C
1
snRNA-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
in vitro differentiated cells
1
primary cell
Biosample term
64
stomach
62
heart
51
muscle of arm
49
lung
48
brain
47
kidney
46
small intestine
45
adrenal gland
43
muscle of leg
42
large intestine
42
placenta
41
A549
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
34
right lung
33
thymus
32
right kidney
31
renal cortex interstitium
31
renal pelvis
27
CD14-positive monocyte
27
left kidney
24
spinal cord
23
B cell
23
CD4-positive, alpha-beta memory T cell
23
spleen
22
liver
19
heart left ventricle
17
sigmoid colon
16
MCF-7
15
CD8-positive, alpha-beta memory T cell
15
K562
15
foreskin keratinocyte
14
adipose tissue
14
body of pancreas
14
gastrocnemius medialis
14
ovary
14
thyroid gland
14
transverse colon
13
mononuclear cell
13
muscle of trunk
13
pancreas
13
psoas muscle
13
trophoblast cell
12
chorionic villus
12
endothelial cell of umbilical vein
12
retina
12
tibial nerve
11
Peyer's patch
11
caudate nucleus
11
endocrine pancreas
11
foreskin fibroblast
11
heart right ventricle
11
upper lobe of left lung
10
T-helper 1 cell
10
fibroblast of lung
10
left renal cortex interstitium
10
left renal pelvis
10
natural killer cell
10
neurosphere
10
pituitary stalk
10
regulatory T cell
10
right renal pelvis
9
CD8-positive, alpha-beta T cell
9
H9
9
HeLa-S3
9
breast epithelium
9
esophagus squamous epithelium
9
layer of hippocampus
9
right renal cortex interstitium
9
skeletal muscle myoblast
9
skeletal muscle tissue
8
CD4-positive, alpha-beta T cell
8
T cell
8
T-helper 17 cell
8
T-helper 2 cell
8
ascending aorta
8
coronary artery
8
dermis blood vessel endothelial cell
8
epithelial cell of prostate
8
esophagus muscularis mucosa
8
fibroblast of cardiac tissue
8
fibroblast of dermis
8
lower leg skin
8
omental fat pad
8
right atrium auricular region
8
tibial artery
7
SK-N-DZ
7
SK-N-SH
7
bronchial epithelial cell
7
chorion membrane
7
eye
7
frontal cortex
7
kidney tubule cell
7
osteoblast
7
parathyroid adenoma
7
prostate gland
7
substantia nigra
7
temporal lobe
7
tongue
7
trophoblast
6
22Rv1
6
T-cell
6
WI38
6
angular gyrus
6
aorta
6
cerebellum
6
choroid plexus epithelial cell
6
cingulate gyrus
6
colonic mucosa
6
duodenal mucosa
6
endometrium adenocarcinoma
6
esophagus
6
fibroblast of breast
6
gastroesophageal sphincter
6
globus pallidus
6
glomerular endothelial cell
6
glomerular visceral epithelial cell
6
hepatocyte
6
immortal human breast epithelial cell line cell
6
keratinocyte
6
limb
6
mammary gland epithelial cell
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
naive T cell
6
neutrophil
6
putamen
6
renal cortical epithelial cell
6
stomach smooth muscle
6
thoracic aorta
6
urinary bladder
6
uterus
6
vagina
5
cardiac fibroblast
5
Ammon's horn
5
GM12878
5
HAP-1
5
HEK293
5
HT-29
5
HepG2
5
IMR-90
5
LNCaP clone FGC
5
MM.1S
5
NAMALWA cell
5
OCI-LY7
5
PC-9
5
T47D
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
cardiac muscle cell
5
epithelial cell of proximal tubule
5
foreskin melanocyte
5
hepatic stellate cell
5
kidney epithelial cell
5
kidney glomerular epithelial cell
5
left cardiac atrium
5
mammary epithelial cell
5
medulla oblongata
5
midbrain
5
middle frontal gyrus
5
occipital lobe
5
pons
5
retinal pigment epithelial cell
5
skeletal muscle cell
5
skin fibroblast
5
smooth muscle cell of the brain vasculature
5
subcutaneous abdominal adipose tissue
5
superior temporal gyrus
4
A172
4
A673
4
ACHN
4
Brodmann (1909) area 46
4
CD1c-positive myeloid dendritic cell
4
CMK
4
Caki2
4
Daoy
4
GM04503
4
GM04504
4
GM06990
4
GM10248
4
GM10266
4
GM12864
4
GM12865
4
GM23248
4
H1-hESC
4
H4
4
H7-hESC
4
HL-60
4
HUES6
4
KARPAS-422 cell
4
KBM-7
4
L1-S8
4
LHCN-M2
4
LNCAP
4
LoVo cell
4
M059J
4
MG63
Organ
1
connective tissue
Life stage
1
adult
Date released
1
February, 2021
Software used
1
encode-ccres
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
organ_slims!
testis
biosample_type!
in vitro differentiated cells
Showing 1 of 1 results
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Download
FileSet
DSR627LDJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP