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Citing CMDGA
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Annotation type
5
candidate regulatory elements
3
target gene predictions
2
chromatin state
1
accessible chromatin
1
eQTL
1
gene expression
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
5
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
5
breast epithelium
Organ
157
kidney
143
musculature of body
130
lung
111
intestine
104
brain
99
epithelium
94
limb
80
connective tissue
75
skin of body
68
large intestine
67
heart
59
extraembryonic component
57
embryo
50
stomach
50
vasculature
44
bodily fluid
40
blood
39
blood vessel
36
small intestine
31
ureter
29
placenta
28
adrenal gland
28
mammary gland
28
penis
27
prostate gland
24
bone element
24
pancreas
21
liver
19
adipose tissue
19
lymph node
19
thymus
17
esophagus
17
eye
17
gonad
16
spinal cord
14
spleen
10
artery
9
lymphoid tissue
9
testis
9
uterus
8
mouth
8
ovary
thyroid gland
6
nerve
6
vein
5
breast
4
bronchus
4
lymphatic vessel
4
skeleton
4
tongue
4
vagina
3
urinary bladder
2
bone marrow
1
nose
Life stage
5
adult
Date released
3
February, 2021
2
September, 2022
Software used
3
encode-ccres
2
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
thyroid gland
relevant_life_stage!
young adult
Showing 5 of 5 results
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Download
FileSet
DSR592FRB
released
Annotation file set
: Candidate regulatory elements for BSS00146 breast epithelium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR385CMS
released
Annotation file set
: Candidate regulatory elements for BSS00145 breast epithelium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR751KRC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE breast epithelium
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR027WWM
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE breast epithelium
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR278EXR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE breast epithelium
Lab:
AMP-T2D consortium
Project:
AMP