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Citing CMDGA
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Annotation type
929
candidate regulatory elements
513
target gene predictions
507
chromatin state
196
accessible chromatin
89
eQTL
89
histone modifications
48
variant allelic effects
36
binding sites
3
pQTL
2
Fine-mapped variants
2
caQTL
2
gene expression
2
sQTL
2
variant to gene
1
other
Annotation Category
2
Genetic variant effects
Annotation type Category
2
RNA-seq
1
Expression arrays
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
3
primary cell
2
tissue
Biosample term
2
islet of Langerhans
Organ
2
pancreas
Life stage
1
adult
Date released
1
August, 2021
1
March, 2023
Software used
1
matrix-eQTL
1
qTLtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
thyroid gland
files.file_type!
tsv
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FileSet
DSR615JGJ
released
Annotation file set
: Lead variant-to-phenotype associations identified using permutations. Contains data for all phenotypes (eGene/Junction) with an sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR276ICN
released
Annotation file set
: sQTL annotation of islet of Langerhans from PMID:25201977
Lab:
AMP-T2D consortium
Project:
AMP