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Schema
Citing CMDGA
Clear Filters
Annotation type
3
binding sites
2
histone modifications
1
accessible chromatin
1
target gene predictions
Annotation Category
6
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
7
cell line
Biosample term
53
HeLa-S3
47
heart
44
H1-hESC
41
kidney
40
brain
36
neural progenitor cell
36
stomach
35
muscle of arm
32
lung
32
muscle of leg
32
placenta
30
CD8-positive, alpha-beta T cell
30
fibroblast
30
large intestine
29
endothelial cell
29
macrophage
29
small intestine
28
muscle of back
27
monocyte
26
left lung
26
thymus
23
right lung
22
K562
22
renal cortex interstitium
22
right kidney
21
adrenal gland
21
spinal cord
20
breast cancer cell
20
islet of Langerhans
20
pericyte cell
20
smooth muscle cell
19
HFFc6
19
adipocyte
18
left kidney
17
CD14-positive monocyte
17
embryonic stem cell
17
keratinocyte
17
liver
15
B cell
15
EndoC_BH1
15
cardiac muscle cell
15
endothelial cell of umbilical vein
15
foreskin fibroblast
14
H9
14
HepG2
14
hepatocyte
14
pancreatic ductal cell
14
retinal pigment epithelial cell
13
astrocyte
13
foreskin keratinocyte
13
heart left ventricle
12
T cell
12
excitatory neuron
12
lymphoblastoid cell line
12
neuroblastoma cell
12
trophoblast cell
11
CD4-positive, alpha-beta memory T cell
11
GM12878
11
erythroblast
11
osteoblast
11
retina
10
Rhabdomyosarcoma
10
gastric cancer cell
10
mesenchymal stem cell
10
neuronal stem cell
10
pancreatic acinar cell
10
regulatory T cell
9
bronchial epithelial cell
9
diffuse intrinsic pontine glioma
9
left cardiac atrium
9
liposarcoma
9
mammary epithelial cell
9
muscle of trunk
9
skeletal muscle myoblast
9
spleen
8
B-lymphoblastoid cell line
8
fibroblast cell line
8
pituitary stalk
7
CD4-positive helper T cell
7
CD4-positive, alpha-beta T cell
7
HEK293
7
IMR-90
7
Jurkat
7
MCF-7
7
T-helper 17 cell
7
choroid plexus epithelial cell
7
esophageal adenocarcinoma
7
fibroblast of cardiac tissue
7
heart right ventricle
7
left renal cortex interstitium
7
lymphocyte
7
mammary gland epithelial cell
7
mesendoderm
7
natural killer cell
7
pancreas
7
pancreatic beta cell
6
22Rv1
6
Chondroid Chordoma
6
GM06990
6
GM12864
6
GM12865
6
HUES8
6
PC-9
6
Rh-4 cell
6
SGBS preadipocytes
6
SK-N-MC
6
adipose tissue
6
chondrocyte
6
colon epithelial cell
6
epithelial cell of prostate
6
fibroblast of lung
6
foreskin melanocyte
6
hESC cell
6
iPSC derived cell line
6
induced pluripotent stem cell
6
neuroblastoma cell line
6
pancreatic delta cell
6
psoas muscle
6
right renal cortex interstitium
6
skeletal muscle satellite cell
6
testis
6
trophoblast
5
A549
5
AG04449 cell
5
AG04450 cell
5
BE(2)-C
5
BJ cell
5
CD1c-positive myeloid dendritic cell
5
CMK
5
CyT49
5
Ewing sarcoma
5
GM19240
5
HCT-116 cell
5
KARPAS-422 cell
5
MG63
5
NAMALWA cell
5
NT2-D1 cell
5
SK-N-DZ
5
SK-N-SH
5
T-cell acute lymphoblastic leukemia
5
T-helper 1 cell
5
acute myeloid leukemia
5
chorionic villus
5
coronary artery
5
enterocyte
5
neurosphere
5
neutrophil
5
osteosarcoma
5
ovary
5
pancreatic alpha cell
5
prostate cancer cell line
5
renal cortical epithelial cell
5
skeletal muscle fiber
5
skin fibroblast
5
smooth muscle cell of the coronary artery
5
type I muscle cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
B-lymphocyte
4
COLO205
4
Caco-2 cell
4
Daoy
4
GM08714
4
GM12873
4
GM12875
4
GM12891
4
GM12892
4
GM18505
4
GM18507
4
GM19099
4
GM19193
4
GM19238
4
GM19239
4
H7-hESC
4
HAC cell
4
HAP-1
4
HBMEC cell
4
HL-60
4
HS-SY-2 cell
4
HT-29
4
HUES6
4
LNCAP
4
LoVo cell
4
MDA-MB-231 cell
4
MM.1S
4
Mantle cell lymphoma
4
NCCIT cell
4
NHEK
4
Normal Human Astrocytes
4
OCI-LY7
4
PANC-1 cell
4
RS4-11 cell
4
WERI-Rb-1
4
acute myeloid leukemia cell
4
aortic endothelial cell
4
common myeloid progenitor, CD34-positive
4
cortical cell of adrenal gland
4
diffuse large B-cell lymphoma
4
endodermal cell
Organ
7
mammary gland
Life stage
adult
Date released
4
February, 2021
1
June, 2020
1
May, 2021
1
October, 2022
Software used
5
macs
1
abc
1
chromhmm
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
organ_slims!
ureter
software_used.software.name!
r
relevant_life_stage!
adult
Showing 7 of 7 results
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Download
FileSet
DSR577YXQ
released
Annotation file set
: Binding sites annotation for MCF-7 (MCF-7) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR294BDQ
released
Annotation file set
: Histone modifications annotation for Breast MCF-7-LTED from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR503YQG
released
Annotation file set
: Histone modifications annotation for Breast MCF-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR120SDK
released
Annotation file set
: Binding sites annotation for Breast MCF-7-LTED from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR694FCO
released
Annotation file set
: Binding sites annotation for Breast MCF-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR249DLQ
released
Annotation file set
: enhancer-gene predicton of MCF-7-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR645VUL
released
Annotation file set
: Accessible chromatin annotation for Breast MCF-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP