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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
37
candidate regulatory elements
21
chromatin state
20
target gene predictions
5
accessible chromatin
3
gene expression
2
variant allelic effects
1
binding sites
1
histone modifications
Annotation Category
3
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
ChIP-seq
1
scRNA-seq
Available data
3
tsv
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
22
neural progenitor cell
12
islet of Langerhans
11
breast cancer cell
11
cardiomyocytes
10
progenitor cell of endocrine pancreas
9
EndoC_BH1
9
H1-hESC
9
extended pluripotent stem (EPS) cells
9
gastric cancer cell
9
induced pluripotent stem cell
9
kidney
8
Rhabdomyosarcoma
8
neuroblastoma cell
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
hESC cell
6
liposarcoma
6
neuroblastoma cell line
6
squamous cell lung carcinoma
5
HepG2
5
T-cell acute lymphoblastic leukemia
5
melanoma cell
5
osteosarcoma
5
subcutaneous adipose tissue
4
bone tissue
4
brain
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
heart
4
rhabdomyosarcoma cell
3
Ewing sarcoma
3
adipose tissue
3
cerebellum
3
diffuse large B-cell lymphoma
3
esophageal squamous cell carcinoma
3
glioblastoma cell
3
glioma cell
3
hepatocyte(AFP)
3
liver
3
lymphoblast
3
lymphoblastoid cell line
3
pancreatic ductal adenocarcinoma
3
pancreatic ductal cell
2
B cell
2
COLO205
2
HS-SY-2 cell
2
Jurkat
2
MCF-7
2
Mantle cell lymphoma
2
RS4-11 cell
2
Rh-4 cell
2
acute myeloid leukemia
2
adipocyte
2
amygdala
2
body of pancreas
2
cardiac muscle cell
2
caudate nucleus
2
chronic lymphocytic leukemia
2
colon adenocarcinoma
2
embryonic stem cell
2
endometriosis
2
epithelial ovarian cancer cell
2
esophageal carcinoma
2
fibroblast
2
fibroblast of cardiac tissue
2
frontal cortex
2
glioblastoma multiforme cancer stem cell
2
heart left ventricle
2
hematopoietic cell
2
hematopoietic multipotent progenitor cell
2
hypothalamus
2
immortal foreskin-derived fibroblast cell line cell
2
immortal neural cell line cell
2
medulloblastoma cell line
2
metastatic melanoma
2
multiple myeloma cell line
2
neuronal stem cell
2
nucleus accumbens
2
occipital lobe
2
omental fat pad
2
pancreatic cell line
2
placenta
2
prostate gland
2
putamen
2
retina
2
right atrium auricular region
2
skeletal muscle tissue
2
smooth muscle cell of the coronary artery
2
stomach
2
substantia nigra
2
synovial sarcoma cell
2
temporal lobe
2
testis
2
tibial nerve
2
triple-negative breast cancer
2
umbilical cord mesenchymal stem cell line cell
2
visceral abdominal adipose tissue
1
143B
1
22Rv1
1
501A
1
5637
1
697 cell
1
769-P cell
1
76NF2V cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG08470 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AGS cell
1
ALL-SIL cell
1
ARH-77 cell
1
AU565 cell
1
Ammon's horn
1
AsPC-1 cell
1
B-lymphocyte
1
BCBL-1 cell
1
BE(2)-C
1
BEAS-2B cell
1
BG03
1
BGC-823 cell
1
BHY cell
1
BICR 31
1
BJ cell
1
BT-474 cell
1
BT-549 cell
1
Barrett's epithelial cell line
1
Barrett's esophagus
1
Brodmann (1909) area 9
1
BxPC-3 cell
1
C1 segment of cervical spinal cord
1
C666-1 cell
1
CA46 cell
1
CAL-33 cell
1
CAL-51 cell
1
CCRF-CEM cell
1
CD4-positive helper T cell
1
CD8-Positive T-Lymphocytes
1
CFPAC-1 cell
1
CHL-1 cell
1
CHP-134 cell
1
CHP-212 cell
1
CMK
1
COLO 679 cell
1
COLO 741 cell
1
COLO-320 cell
1
COR-L311 cell
1
CTV-1 cell
1
CaSki cell
1
Caco-2 cell
1
Caki-1 cell
1
Calu-1 cell
1
Calu-3 cell
1
Capan-1 cell
1
Capan-2 cell
1
Crypt of Lieberkuhn
1
CyT49
1
D283 Med cell
1
D341 Med cell
1
DK cell
1
DLD-1 cell
1
DMS 114 cell
1
DMS 53 cell
1
DMS 79 cell
1
DND-41 cell
1
DOHH-2 cell
1
DU 145 cell
1
Daudi
1
Detroit562
1
EAhy 926 cell
1
EBC-1
1
EJM cell
1
EOL-1 cell
1
FLO-1 cell
1
FU97 cell
1
FaDu cell
1
G-401 cell
1
GM06990
1
GM10847
1
GM12864
1
GM12865
1
GM12866
1
GM12872
1
GM12873
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM18505
1
GM18507
1
GM18526
Organ
4
heart
Life stage
1
adult
1
embryonic
1
fetal
Date released
2
February, 2021
1
August, 2021
1
February, 2020
Software used
3
r
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
ureter
biosample_type!
primary cell
Showing 4 of 4 results
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Download
FileSet
DSR321UPS
released
Annotation file set
: Gene expression annotation of heart left ventricle from single-cell transcriptome analysis map the developmental track of the human heart
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR384FIT
released
Annotation file set
: Gene expression of heart (atria and ventricle)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR231NZC
released
Annotation file set
: Histone modifications annotation for Adipocyte Fetal_Heart from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR670YAY
released
Annotation file set
: Gene expression levels of Heart fetal from RNA-seq (GSE63634) + RNA-seq (ENCODE) + RNA-seq (GSE106690)
Lab:
AMP-T2D consortium
Project:
AMP