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Citing CMDGA
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Annotation type
28
target gene predictions
21
chromatin state
20
accessible chromatin
8
gene expression
5
eQTL
2
pQTL
1
binding sites
1
caQTL
1
other
Annotation Category
5
Genetic variant effects
Annotation type Category
5
RNA-seq
Available data
1
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
7
primary cell
5
tissue
Biosample term
2
cartilage tissue
1
kidney
1
subcutaneous adipose tissue
1
synovial joint
Organ
3
connective tissue
1
adipose tissue
1
kidney
Life stage
4
adult
Date released
4
August, 2021
1
February, 2021
Software used
4
fastqtl
3
peer
1
matrix-eQTL
Lab
AMP-T2D consortium
3
ITG
1
Karen Mohlke, UNC
1
Katalin Susztak, Upenn
Project
3
ITG
2
AMP
RFA
3
ITG
1
AMP
1
AMP2
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ureter
lab.title!
AMP-T2D consortium
Showing 5 of 5 results
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FileSet
DSR474VCE
released
Annotation file set
: eQTL of synovial tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR376WYD
released
Annotation file set
: eQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR276XRX
released
Annotation file set
: eQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR965YTD
released
Annotation file set
: METSIM RNAseq local eQTLs – all results, including non-significant cis-eQTLs
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP