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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
23
K562
16
brain
10
pituitary stalk
8
GM12878
3
SK-N-SH
3
caudate nucleus
3
layer of hippocampus
2
Ammon's horn
2
Brodmann (1909) area 46
2
GM19238
2
GM19239
2
GM19240
2
HAP-1
2
NAMALWA cell
2
OCI-LY7
2
SK-N-DZ
2
angular gyrus
2
cerebellum
2
cingulate gyrus
2
frontal cortex
2
substantia nigra
2
temporal lobe
1
A172
1
BE(2)-C
1
CMK
1
Daoy
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
GM06990
1
GM12875
1
GM12891
1
GM12892
1
GM18505
1
GM19099
1
GM19193
1
H54
1
HL-60
1
KBM-7
1
M059J
1
NB4
1
RPMI8226
1
SK-N-MC
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cerebellar cortex
1
choroid plexus epithelial cell
1
dorsolateral prefrontal cortex
1
globus pallidus
1
inferior parietal cortex
1
medulla oblongata
1
medulloblastoma
1
midbrain
1
middle frontal gyrus
1
pons
1
putamen
1
undifferentiated ESC (H9 cell line)
Organ
1
brain
0
blood
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
organ_slims!
ureter
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Download
FileSet
DSR383OMT
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Progenitor (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP