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Schema
Citing CMDGA
Clear Filters
Annotation type
6
target gene predictions
candidate regulatory elements
1
accessible chromatin
Annotation Category
6
Target gene links
1
cis-regulatory elements
Annotation type Category
10
ChIP-seq
7
ATAC-seq
7
DNase-seq
4
H3K27ac ChIP-Seq
3
snATAC-seq
1
RNA-seq
1
snRNA-seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
7
in vitro differentiated cells
Biosample term
25
heart
24
stomach
20
A549
19
CD14-positive monocyte
19
brain
18
kidney
18
muscle of arm
17
adrenal gland
17
small intestine
16
lung
16
muscle of leg
16
placenta
15
large intestine
14
common myeloid progenitor, CD34-positive
13
left lung
13
muscle of back
13
thymus
12
renal pelvis
12
right kidney
12
right lung
11
B cell
11
hematopoietic multipotent progenitor cell
11
renal cortex interstitium
10
pituitary stalk
10
spinal cord
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
liver
8
K562
8
heart left ventricle
8
pancreas
8
spleen
8
trophoblast cell
7
CD8-positive, alpha-beta memory T cell
7
MCF-7
7
adipocyte
7
adipose tissue
7
sigmoid colon
6
body of pancreas
6
caudate nucleus
6
dendritic cell
6
endothelial cell of umbilical vein
6
gastrocnemius medialis
6
hepatocyte
6
mononuclear cell
6
ovary
6
psoas muscle
6
retina
6
skeletal muscle myoblast
6
thyroid gland
6
tibial nerve
6
transverse colon
5
cardiac fibroblast
5
T cell
5
coronary artery
5
fibroblast of cardiac tissue
5
foreskin keratinocyte
5
frontal cortex
5
heart right ventricle
5
muscle of trunk
5
natural killer cell
5
osteoblast
5
regulatory T cell
5
right atrium auricular region
5
tibial artery
4
HeLa-S3
4
Peyer's patch
4
T-helper 1 cell
4
ascending aorta
4
breast epithelium
4
cardiac muscle cell
4
chorion membrane
4
chorionic villus
4
choroid plexus epithelial cell
4
endocrine pancreas
4
epithelial cell of prostate
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin fibroblast
4
globus pallidus
4
glomerular endothelial cell
4
glomerular visceral epithelial cell
4
hepatic stellate cell
4
kidney tubule cell
4
left renal cortex interstitium
4
left renal pelvis
4
mammary gland epithelial cell
4
medulla oblongata
4
mesenchymal stem cell
4
midbrain
4
neural progenitor cell
4
occipital lobe
4
pons
4
putamen
4
renal cortical epithelial cell
4
right renal cortex interstitium
4
right renal pelvis
4
skin fibroblast
4
superior temporal gyrus
4
testis
4
upper lobe of left lung
3
Ammon's horn
3
CD4-positive helper T cell
3
CD8-positive, alpha-beta T cell
3
GM12878
3
H1-hESC
3
H7-hESC
3
HAP-1
3
HT-29
3
HepG2
3
IMR-90
3
Jurkat
3
KARPAS-422 cell
3
LoVo cell
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-9
3
SK-N-DZ
3
SK-N-SH
3
T-helper 17 cell
3
T-helper 2 cell
3
U937
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
bipolar neuron
3
brain pericyte
3
bronchial epithelial cell
3
cerebellum
3
endometrium adenocarcinoma
3
epithelial cell of proximal tubule
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
kidney capillary endothelial cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
layer of hippocampus
3
left cardiac atrium
3
limb
3
mesendoderm
3
middle frontal gyrus
3
monocyte
3
naive T cell
3
neurosphere
3
omental fat pad
3
prostate gland
3
retinal pigment epithelial cell
3
skeletal muscle cell
3
skeletal muscle tissue
3
smooth muscle cell of the brain vasculature
3
tongue
3
trophoblast
3
uterus
2
hindlimb muscle
2
muscle of leg
2
22Rv1
2
A172
2
A673
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
BJAB cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CMK
2
Caco-2 cell
2
Caki2
2
Daoy
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM18507
2
GM19240
2
GM23248
2
H4
2
H9
2
HCT-116 cell
2
HEK293
2
HL-60
2
HUES6
2
HuH-7
2
KBM-7
2
L1-S8
2
L1-S8R
2
LHCN-M2
2
LNCAP
Organ
7
connective tissue
Life stage
1
adult
1
unknown
Date released
4
May, 2021
2
September, 2022
1
June, 2020
Software used
4
abc
2
r
1
macs
Lab
4
Jesse Engreitz, Stanford University
3
AMP-T2D consortium
Project
7
AMP
RFA
7
AMP
organ_slims!
urinary bladder
annotation_type!
candidate regulatory elements
Showing 7 of 7 results
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Download
FileSet
DSR339QKV
released
Annotation file set
: Target gene predictions for BSS00039 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619LYX
released
Annotation file set
: Target gene predictions for BSS00038 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR039HOA
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d14 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR164LWB
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d6 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR542JXE
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d2 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR941KCA
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d0 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR073DMC
released
Annotation file set
: Accessible chromatin annotation for Adipocyte Adipocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP