Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
111
candidate regulatory elements
76
target gene predictions
48
histone modifications
21
accessible chromatin
19
gene expression
17
variant allelic effects
16
binding sites
6
chromatin state
Annotation Category
6
cis-regulatory elements
Annotation type Category
6
ChIP-seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
72
hg19
GRCh38
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
1
caudate nucleus
1
cingulate gyrus
1
layer of hippocampus
1
mid-frontal lobe
1
substantia nigra
1
temporal lobe
Organ
7
connective tissue
6
brain
4
intestine
4
pancreas
3
epithelium
3
large intestine
3
liver
3
musculature of body
2
adipose tissue
2
blood
2
bodily fluid
1
blood vessel
1
bone element
1
bone marrow
1
embryo
1
lung
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
vasculature
1
vein
Date released
6
August, 2017
Software used
6
chromhmm
Lab
6
Stephen Parker, UMich
Project
6
AMP
RFA
6
AMP
organ_slims!
urinary bladder
assembly!
GRCh38
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
FileSet
TSTSR828132
released
Annotation file set
: ChromHMM 13-state model for substantia nigra
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR798820
released
Annotation file set
: ChromHMM 13-state model for Inferior temporal lobe
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR013323
released
Annotation file set
: ChromHMM 13-state model for hippocampus middle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR903521
released
Annotation file set
: ChromHMM 13-state model for cingulate gyrus
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR632525
released
Annotation file set
: ChromHMM 13-state model for Mid-frontal lobe
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR952582
released
Annotation file set
: ChromHMM 13-state model for Anterior caudate
Lab:
Stephen Parker, UMich
Project:
AMP