Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
5
target gene predictions
4
accessible chromatin
1
candidate regulatory elements
1
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
snATAC-seq
Available data
4
bed bed3+
4
bigWig
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
3
colon epithelial cell
3
enterocyte
2
enteric smooth muscle cell
1
HCT-116 cell
1
HT-29
1
Peyer's patch
1
RKO
1
SW480
1
crypt of Lieberkuhn
1
enterocyte of epithelium of small intestine
1
large intestine
1
paneth cell
1
sigmoid colon
1
small intestine
1
small intestine goblet cell
1
transverse colon
Organ
4
epithelium
4
intestine
3
large intestine
1
small intestine
Date released
4
November, 2021
Software used
4
macs
Lab
4
Bing Ren, UCSD
Project
4
ENCODE
RFA
4
ENCODE3
organ_slims!
uterus
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR273VIV
released
Annotation file set
: Accessible chromatin annotation of Small Intestinal Enterocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR609IPL
released
Annotation file set
: Accessible chromatin annotation of Colon Epithelial Cell 3 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR419PGV
released
Annotation file set
: Accessible chromatin annotation of Colon Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR903BJH
released
Annotation file set
: Accessible chromatin annotation of Colon Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE