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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
3
bed bed3+
1
bed bed9
1
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
3
cell line
1
tissue
Biosample term
45
islet of Langerhans
25
pancreatic ductal cell
24
body of pancreas
22
pancreas
21
EndoC_BH1
18
pancreatic acinar cell
18
pancreatic beta cell
17
pancreatic alpha cell
16
pancreatic delta cell
15
endocrine pancreas
10
pancreatic stellate cell
6
pancreatic polypeptide-secreting cell
5
Panc1
4
pancreatic A cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
type B pancreatic cell
3
8988T
3
HPDE6-E6E7
3
pancreatic quiescent stellate cell
2
pancreatic endocrine cell
1
activated pancreatic stellate cell
1
pancreatic D cell
1
pancreatic PP cell
1
quiescent pancreatic stellate cell
Disease term
3
pancreatic adenocarcinoma
Organ
4
pancreas
1
epithelium
Life stage
3
adult
Date released
3
September, 2022
1
February, 2024
Software used
2
r
1
chromhmm
1
macs
Lab
3
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
4
AMP
RFA
4
AMP
organ_slims!
vagina
Showing 4 of 4 results
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Download
FileSet
DSR244FQQ
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Gamma
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR885GKL
released
Annotation file set
: Candidate regulatory elements for BSS00003 8988T from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR947SRN
released
Annotation file set
: Target gene predictions for BSS00003 8988T from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR573XEL
released
Annotation file set
: Chromatin states for BSS00003 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP