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Schema
Citing CMDGA
Clear Filters
Annotation type
45
accessible chromatin
35
gene expression
33
differential activity
29
target gene predictions
8
variant allelic effects
4
candidate regulatory elements
4
histone modifications
3
chromatin state
2
binding sites
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
tissue
4
cell line
Biosample term
2
Panc1
1
8988T
1
HPDE6-E6E7
Disease term
1
pancreatic adenocarcinoma
1
pancreatic ductal adenocarcinoma
Organ
89
epithelium
65
skin of body
61
connective tissue
47
bodily fluid
44
embryo
43
blood
43
lung
32
vasculature
30
brain
30
kidney
28
mammary gland
28
penis
23
prostate gland
21
blood vessel
21
bone element
21
lymph node
16
extraembryonic component
11
musculature of body
10
intestine
10
large intestine
8
eye
8
liver
6
heart
6
uterus
6
vein
4
artery
4
bronchus
4
lymphatic vessel
4
mouth
4
pancreas
3
placenta
2
bone marrow
2
esophagus
2
gonad
2
limb
2
spinal cord
2
testis
1
lymphoid tissue
1
nose
Life stage
2
adult
2
unknown
Date released
3
September, 2022
1
February, 2021
Software used
3
r
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
vagina
biosample_type!
tissue
Showing 4 of 4 results
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Download
FileSet
DSR623CCG
released
Annotation file set
: Candidate regulatory elements for BSS01405 Panc1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR289QIP
released
Annotation file set
: Candidate regulatory elements for BSS00703 HPDE6-E6E7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR885GKL
released
Annotation file set
: Candidate regulatory elements for BSS00003 8988T from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR014CHT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE Panc1
Lab:
AMP-T2D consortium
Project:
AMP