Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
39
candidate regulatory elements
22
chromatin state
22
target gene predictions
10
accessible chromatin
5
gene expression
4
binding sites
3
histone modifications
2
variant allelic effects
Annotation Category
5
Gene expression levels
Annotation type Category
4
RNA-seq
1
scRNA-seq
Available data
5
tsv
File set status
5
released
Organism
5
Homo sapiens
Biosample type
3
tissue
2
primary cell
Biosample term
16
epithelial cell of proximal tubule
15
monocyte
14
glomerular endothelial cell
13
hepatocyte
11
cardiomyocytes
11
islet of Langerhans
10
endothelial cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
EndoC_BH1
8
H1-hESC
7
T-helper 1 cell
7
T-helper 17 cell
7
kidney
7
kidney loop of Henle thin ascending limb epithelial cell
7
neural progenitor cell
7
regulatory T cell
6
kidney interstitial cell
6
pancreatic ductal cell
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
subcutaneous adipose tissue
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
nephron progenitor
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
B Cell
3
CD8-positive, alpha-beta T cell
3
Classical Dendritic Cell
3
Connecting Tubule Cell
3
Connecting Tubule Intercalated Cell Type A
3
Connecting Tubule Principal Cell
3
Cortical Thick Ascending Limb Cell
3
Cycling Endothelial Cell
3
Cycling Epithelial Cell
3
Cycling Mononuclear Phagocyte
3
Cycling T Cell
3
Cytotoxic T Cell
3
Degenerative Connecting Tubule Cell
3
Degenerative Connecting Tubule Cell / Principal Cell
3
Degenerative Cortical Thick Ascending Limb Cell
3
Degenerative Distal Convoluted Tubule Cell
3
Degenerative Intercalated Cell Type A
3
Degenerative Principal Cell
3
Degenerative Proximal Tubule Epithelial Cell
3
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
Descending Thin Limb Cell Type 1
3
Distal Convoluted Tubule Cell Type 1
3
Fibroblast
3
Intercalated Cell Type A
3
Intercalated Cell Type B
3
M2 Macrophage
3
Mast Cell
3
Medullary Thick Ascending Limb Cell
3
Mesangial Cell
3
Monocyte
3
Monocyte-derived Cell
3
Myofibroblast
3
Natural Killer T Cell
3
Natural Killer T Cell Type 1
3
Natural Killer T Cell Type 2
3
Non-Classical Monocyte
3
Parietal Epithelial Cell
3
Plasma Cell
3
Plasmacytoid Dendritic Cell
3
Podocyte
3
Principal Cell
3
Proximal Tubule Epithelial Cell Segment 1 and 2
3
Proximal Tubule Epithelial Cell Segment 3
3
Regulatory T Cell
3
Renin-positive Juxtaglomerular Granular Cell
3
S-shaped body
3
T Cell
3
T-helper 2 cell
3
Transitional Principal-Intercalated Cell
3
adipose tissue
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
heart
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
2
B cell
2
Kupffer cell
2
T follicular helper cell
2
adipocyte
2
body of pancreas
2
cerebellum
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
frontal cortex
2
kidney inner medulla collecting duct intercalated cell
2
leukocyte
2
macrophage
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
natural killer cell
2
omental fat pad
2
osteoblast
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
renal vesicle
2
right atrium auricular region
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
smooth muscle cell
2
tibial nerve
2
visceral abdominal adipose tissue
1
Ammon's horn
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
C1 segment of cervical spinal cord
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
Schwann cell
1
activated pancreatic stellate cell
1
adrenal gland
1
alpha-beta T cell
1
alternatively activated macrophage
1
amygdala
1
anterior cingulate cortex
1
aortic valve
1
astrocyte
1
bladder
1
brain
1
breast - mammary tissue
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac ventricle fibroblast
1
caudate nucleus
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cerebellum (Hemisphere)
1
cervix - ectocervix
1
cervix - endocervix
1
cholangiocyte
1
colon - sigmoid
1
colon - transverse
1
cytotoxic T cell
1
dendritic cell
1
diencephalon
1
dorsolateral prefrontal cortex
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
epithelial cell of distal tubule
1
erythroid lineage cell
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
excitatory neuron
1
fallopian tube
1
gastrocnemius medialis(Muscle - Skeletal)
1
glial cell
1
heart left ventricle
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
hepatic stellate cell
1
hippocampal neuron
1
hypothalamus
1
inflammatory macrophage
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
kidney - cortex
1
kidney - medulla
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
Organ
3
heart
2
connective tissue
Life stage
2
adult
1
embryonic
1
fetal
1
unknown
Date released
2
February, 2021
1
August, 2021
1
February, 2020
1
November, 2020
Software used
5
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
vasculature
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR321UPS
released
Annotation file set
: Gene expression annotation of heart left ventricle from single-cell transcriptome analysis map the developmental track of the human heart
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR384FIT
released
Annotation file set
: Gene expression of heart (atria and ventricle)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR703WRC
released
Annotation file set
: Gene expression annotation of osteoporosis cell from 4 cell lines for GSE120755 RNA-seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR204TLG
released
Annotation file set
: Gene expression annotation of E-MTAB-6835 - RNA-seq of primary mesenchymal stem cells -derived osteoblasts (differentiated with BMP2) from 3 human donors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR670YAY
released
Annotation file set
: Gene expression levels of Heart fetal from RNA-seq (GSE63634) + RNA-seq (ENCODE) + RNA-seq (GSE106690)
Lab:
AMP-T2D consortium
Project:
AMP