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Citing CMDGA
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Annotation type
8
candidate regulatory elements
6
target gene predictions
5
chromatin state
4
binding sites
1
accessible chromatin
1
histone modifications
Annotation Category
6
Target gene links
Annotation type Category
6
DNase-seq
4
ChIP-seq
2
ATAC-seq
2
H3K27ac ChIP-Seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
4
primary cell
2
cell line
Biosample term
19
A549
17
lung
13
left lung
11
right lung
4
fibroblast of lung
3
upper lobe of left lung
2
IMR-90
2
PC-9
2
type II pneumocyte
1
NCI-H226 cell
1
NCI-H460 cell
1
WI38
1
type I pneumocyte
Organ
6
lung
4
connective tissue
Life stage
2
unknown
1
adult
1
embryonic
Date released
4
September, 2022
2
May, 2021
Software used
4
r
2
abc
Lab
4
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
organ_slims!
vasculature
Showing 6 of 6 results
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FileSet
DSR772ORX
released
Annotation file set
: Target gene predictions for BSS00720 IMR-90 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR340GAW
released
Annotation file set
: Target gene predictions for BSS00342 fibroblast of lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR498HKW
released
Annotation file set
: Target gene predictions for BSS00341 fibroblast of lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR226WKJ
released
Annotation file set
: Target gene predictions for BSS00339 fibroblast of lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR895REE
released
Annotation file set
: enhancer-gene predicton of IMR90-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR319ZJZ
released
Annotation file set
: enhancer-gene predicton of fibroblast_of_lung-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP