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Schema
Citing CMDGA
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Annotation type
15
gene expression
4
eQTL
3
target gene predictions
2
accessible chromatin
1
meQTL
1
sQTL
0
binding sites
Annotation Category
4
Genetic variant effects
Annotation type Category
4
RNA-seq
File set status
4
released
Genome assembly (visualization)
3
GRCh38
1
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
14
islet of Langerhans
7
liver
7
macrophage
6
lymphoblastoid cell line
6
subcutaneous adipose tissue
4
adipose tissue
4
monocyte
3
blood cell
3
fibroblast
3
putamen
3
skin of body
3
substantia nigra
2
HepG2
2
T cell
2
amygdala
2
anterior cingulate cortex
2
articular chondrocyte
2
blood
2
brain
2
cartilage tissue
2
caudate nucleus
2
cerebellum
2
coronary artery
2
erythroblast
2
fibroblast of lung
2
foreskin fibroblast
2
frontal cortex
2
hypothalamus
2
iPSC derived cell line
2
muscle
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
2
nucleus accumbens
2
omental fat pad
2
regulatory T cell
2
right atrium auricular region
2
skeletal muscle tissue
2
spinal cord
2
tibial artery
2
tibial nerve
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
Ammon's horn
1
BE(2)-C
1
BJ cell
1
C1 segment of cervical spinal cord
1
Caco-2 cell
1
DND-41 cell
1
ECC-1
1
GM06990
1
GM08714
1
GM10847
1
GM12801
1
GM12864
1
GM12865
1
GM12872
1
GM12873
1
GM12874
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM15510
1
GM18505
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
GM19238
1
GM19239
1
GM19240
1
H1-hESC
1
HAC cell
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HEK293-T-REx cell
1
HFF-Myc
1
HGPS cell
1
HL-60
1
HeLa-S3
1
IMR-90
1
K562
1
Leydig cell
1
MCF-7
1
MCF10A-Er-Src cell
1
NB4
1
NHEK
1
NT2-D1 cell
1
Normal Human Astrocytes
1
PANC-1 cell
1
PFSK-1 cell
1
Raji cell
1
SAEC
1
SH-SY5Y cell
1
SK-N-MC
1
SK-N-SH
1
SK-N-SH_RA
1
T follicular helper cell
1
T-47D cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
U-87 MG
1
U2OS
1
WERI-Rb-1
1
WI-38 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adrenal gland
1
aortic adventitial fibroblast
1
ascending aorta
1
body of pancreas
1
breast
1
cardiac fibroblast
1
cardiac muscle cell
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
endothelial cell
1
epithelial cell of proximal tubule
1
esophageal epithelial cell
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
fibroblast of dermis
1
fibroblast of mammary gland
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
gastrocnemius medialis(Muscle - Skeletal)
1
glioblastoma cell
1
heart left ventricle
1
helper T cell
1
kidney
1
layer of hippocampus
1
left ventricle myocardium
1
lung
1
mammary epithelial cell
1
mesenchymal stem cell
1
microglial cell
1
minor salivary gland
1
myotube
1
naive B cel
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
nephron tubule
1
osteoblast
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
progenitor cell
1
prostate gland
1
renal epithelial cell
1
renal glomerulus
1
retina
1
retinal pigment epithelial cell
1
right lobe of liver
1
sensory neuron
1
skeletal muscle myoblast
1
small intestine
1
smooth muscle cell
1
spleen
1
stomach
1
synovial joint
1
testis
1
thyroid gland
1
transverse colon
1
type I muscle cell
1
type II muscle cell
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Life stage
1
adult
Date released
3
January, 2022
1
May, 2021
Software used
3
qTLtools
1
limix
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
vein
software_used.software.name!
macs
Showing 4 of 4 results
table-tab-icon
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FileSet
DSR338LAI
released
Annotation file set
: monocyte naive eQTL of studay Schmiedel_2018 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR085HYL
released
Annotation file set
: monocyte CD16 naive eQTL of studay Schmiedel_2018 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR583OYR
released
Annotation file set
: monocyte eQTL of studay BLUEPRINT from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR693IVW
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP