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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
21
coronary artery
19
tibial artery
16
ascending aorta
16
endothelial cell of hepatic sinusoid
13
aorta
11
thoracic aorta
10
dermis blood vessel endothelial cell
8
fibroblast of pulmonary artery
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
5
brain microvascular endothelial cell
5
fibroblast of the aortic adventitia
4
aortic endothelial cell
4
pancreatic endothelial cell
2
capillary endothelial cell
2
endothelial cell of coronary artery
1
brain microvascular endothelial cell
1
abdominal aorta artery
1
aorta wall
1
aortic smooth muscle cell
1
circle of Willis
1
placental villus capillary endothelial cell
Organ
5
blood vessel
5
brain
5
epithelium
5
vasculature
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
1
January, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
vein
kidney
Showing 5 of 5 results
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Download
FileSet
DSR205TDH
released
Annotation file set
: Candidate regulatory elements for BSS00143 brain microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR658UET
released
Annotation file set
: Target gene predictions for BSS00143 brain microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR909RVE
released
Annotation file set
: Chromatin states for BSS00143 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR636KAE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR491SOC
released
Annotation file set
: Accessible chromatin annotation of brain microvascular endothelial cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP