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Schema
Citing CMDGA
Clear Filters
Annotation type
6
eQTL
5
gene expression
3
Fine-mapped variants
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
differential activity
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ATAC-seq
1
ChIP-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
8
adipose tissue
4
omental fat pad
3
subcutaneous adipose tissue
1
adipose-derived mesenchymal stem cell
1
subcutaneous abdominal adipose tissue
Organ
3
adipose tissue
3
connective tissue
Life stage
1
adult
Date released
1
August, 2017
1
January, 2020
1
September, 2018
Software used
2
macs
1
chromhmm
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
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FileSet
DSR687BVG
released
Annotation file set
: Accessible chromatin annotation of adipose white tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR978YHK
released
Annotation file set
: ATAC-seq sites in subcutaneous adipose tissue for 1 sample from ENCODE
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR804392
released
Annotation file set
: ChromHMM 13-state model for Adipose
Lab:
Stephen Parker, UMich
Project:
AMP