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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
chromatin state
1
eQTL
1
variant allelic effects
Annotation Category
2
Genetic variant effects
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
1
ChIP-seq
1
RNA-seq
Available data
3
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
8
adipose tissue
4
subcutaneous adipose tissue
2
adipose tissue derived mesenchymal stem cell
1
omental fat pad
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
subcutaneous abdominal adipose tissue
1
visceral abdominal adipose tissue
1
white adipose cell
1
white adipose tissue
Organ
4
adipose tissue
4
connective tissue
Life stage
adult
Date released
1
August, 2017
1
January, 2020
1
January, 2022
1
May, 2020
Software used
1
chromhmm
1
deltasvm
1
macs
1
qTLtools
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
relevant_life_stage!
adult
Showing 4 of 4 results
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Download
FileSet
DSR943WPJ
released
Annotation file set
: adipose subcutaneous eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR802UOO
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose white tissue ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR687BVG
released
Annotation file set
: Accessible chromatin annotation of adipose white tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR804392
released
Annotation file set
: ChromHMM 13-state model for Adipose
Lab:
Stephen Parker, UMich
Project:
AMP