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Schema
Citing CMDGA
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Annotation type
13
gene expression
8
accessible chromatin
4
histone modifications
4
target gene predictions
3
candidate regulatory elements
2
chromatin state
2
variant allelic effects
1
binding sites
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
Biosample term
11
foreskin keratinocyte
7
adipose tissue
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
5
breast epithelium
5
omental fat pad
5
subcutaneous abdominal adipose tissue
4
bronchial epithelial cell
4
epithelial cell of prostate
4
myoepithelial cell of mammary gland
3
hepatocyte
3
keratinocyte
3
kidney tubule cell
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
iris pigment epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
non-pigmented ciliary epithelial cell
2
pulmonary artery endothelial cell
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
subcutaneous adipose tissue
1
amniotic epithelial cell
1
colon epithelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
kidney capillary endothelial cell
1
luminal epithelial cell of mammary gland
Organ
3
epithelium
3
liver
0
adipose tissue
Life stage
2
embryonic
1
unknown
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR201DTC
released
Annotation file set
: Candidate regulatory elements for BSS00556 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR654OFJ
released
Annotation file set
: Candidate regulatory elements for BSS00554 hepatocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR731RPD
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE hepatocyte
Lab:
AMP-T2D consortium
Project:
AMP