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Schema
Citing CMDGA
Clear Filters
Annotation type
141
candidate regulatory elements
86
target gene predictions
79
chromatin state
26
accessible chromatin
15
binding sites
9
gene expression
9
histone modifications
6
Fine-mapped variants
6
eQTL
5
variant allelic effects
2
caQTL
2
differential activity
Annotation Category
5
Genetic variant effects
Annotation type Category
2
ATAC-seq
2
DNase-seq
1
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
tissue
1
primary cell
Biosample term
2
coronary artery
2
tibial artery
1
type II pneumocyte
Organ
41
epithelium
17
brain
16
connective tissue
16
kidney
15
vasculature
11
pancreas
10
heart
9
blood vessel
8
limb
7
musculature of body
4
artery
4
liver
3
adipose tissue
3
intestine
3
ureter
2
esophagus
2
eye
2
nerve
2
stomach
1
adrenal gland
1
bronchus
1
lung
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
1
vein
Date released
4
May, 2020
1
February, 2024
Software used
5
deltasvm
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR141FAK
released
Annotation file set
: Variant allelic effects annotation of Pulmonary alveolar type II cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR238UZR
released
Annotation file set
: Genetic variants with deltaSVM predictions in tibial artery ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR402HCQ
released
Annotation file set
: Genetic variants with deltaSVM predictions in coronary artery DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR283WPA
released
Annotation file set
: Genetic variants with deltaSVM predictions in artery tibial DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR985HJQ
released
Annotation file set
: Genetic variants with deltaSVM predictions in coronary artery ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP