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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
22
foreskin keratinocyte
21
coronary artery
21
keratinocyte
19
foreskin fibroblast
19
tibial artery
12
fibroblast of dermis
12
skin fibroblast
10
dermis blood vessel endothelial cell
10
lower leg skin
8
dermis lymphatic vessel endothelial cell
8
fibroblast of pulmonary artery
7
GM23248
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
6
iPS DF 4.7 Cell Line
6
skin of body
5
Afferent / Efferent Arteriole Endothelial Cell
5
RPMI7951
5
SK-MEL-5
5
iPS DF 19.11
4
aortic endothelial cell
4
dermis microvascular lymphatic vessel endothelial cell
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
3
COLO829
3
epidermal melanocyte
3
suprapubic skin
2
basal cell of epidermis
2
endothelial cell of coronary artery
2
granular cell of epidermis
2
skin of forearm
2
skin of prepuce of penis
1
BJ
1
HGPS cell
1
abdominal aorta artery
1
circle of Willis
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
iPS DF 4.7
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
Organ
4
skin of body
0
artery
Life stage
3
newborn
1
postnatal
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR541UTS
released
Annotation file set
: Candidate regulatory elements for BSS00732 iPS DF 19.7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR566EYE
released
Annotation file set
: Target gene predictions for BSS00732 iPS DF 19.7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR270HTB
released
Annotation file set
: Chromatin states for BSS00732 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR403UEF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE iPS DF 19.7
Lab:
AMP-T2D consortium
Project:
AMP