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Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
accessible chromatin
3
candidate regulatory elements
3
chromatin state
3
target gene predictions
2
eQTL
2
variant allelic effects
1
caQTL
1
gene expression
Annotation Category
3
Target gene links
3
cis-regulatory elements
Annotation type Category
5
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
3
bed bed9
1
bigBed bed9
1
bigWig
File set status
6
released
Genome assembly (visualization)
6
hg19
3
GRCh38
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
6
coronary artery
5
tibial artery
4
vagina
2
fibroblast of pulmonary artery
2
pulmonary artery endothelial cell
1
smooth muscle cell of the coronary artery
Organ
6
artery
6
blood vessel
6
heart
6
vasculature
0
vagina
Life stage
5
adult
Date released
4
September, 2022
1
May, 2019
1
May, 2021
Software used
3
chromhmm
2
r
1
abc
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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FileSet
DSR422SRD
released
Annotation file set
: Target gene predictions for BSS00243 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR035MSO
released
Annotation file set
: Target gene predictions for BSS00242 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR823JJW
released
Annotation file set
: Chromatin states for BSS00243 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR679HDX
released
Annotation file set
: Chromatin states for BSS00242 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR233ZIX
released
Annotation file set
: enhancer-gene predicton of coronary_artery-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR716IKT
released
Annotation file set
: ChromHMM 4-state model for coronary artery from ENCODE ChIP-seq data
Lab:
AMP-T2D consortium
Project:
AMP