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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
8
ChIP-seq
6
HiC
5
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
15
K562
5
GM12878
5
HAP-1
5
NAMALWA cell
5
OCI-LY7
4
CMK
4
GM06990
4
HL-60
4
KBM-7
4
RPMI8226
4
peripheral blood mononuclear cell
3
GM12875
3
GM19240
3
NB4
2
GM12891
2
GM12892
2
GM19238
2
GM19239
2
NAMALWA
1
GM12873
1
GM12874
1
Karpas-422
1
peripheral blood stem cell
Organ
5
blood
5
bodily fluid
Life stage
3
adult
Date released
2
September, 2022
1
February, 2021
1
June, 2020
1
May, 2021
Software used
2
r
1
abc
1
encode-ccres
1
macs
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR518KFU
released
Annotation file set
: Candidate regulatory elements for BSS00439 GM12878 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR835PAE
released
Annotation file set
: Target gene predictions for BSS00439 GM12878 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR589MOX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE GM12878
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR117MIS
released
Annotation file set
: enhancer-gene predicton of GM12878-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR789FEO
released
Annotation file set
: Accessible chromatin annotation for Blood GM12878 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP