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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
68
lung
62
A549
52
left lung
45
right lung
41
K562
16
GM12878
16
fibroblast of lung
16
upper lobe of left lung
9
IMR-90
8
GM06990
8
GM19240
8
HAP-1
8
HL-60
8
NAMALWA cell
8
OCI-LY7
8
PC-9
7
CMK
7
GM12875
7
GM19238
7
GM19239
7
RPMI8226
7
WI38
7
type II pneumocyte
6
GM12891
6
GM12892
6
KBM-7
6
peripheral blood mononuclear cell
5
NB4
5
lung microvascular endothelial cell
4
GM12873
4
GM18505
4
GM19099
4
GM19193
4
NCI-H226 cell
4
NCI-H460 cell
4
type I pneumocyte
3
GM10847
3
GM12872
3
GM18526
3
GM18951
3
peripheral blood stem cell
2
NAMALWA
2
blood
1
GM12874
1
Karpas-422
1
NCI-H226
1
NCI-H460
1
endothelial cell of artery
1
lung neuroendocrine cell
1
whole blood
Organ
5
epithelium
5
lung
5
vasculature
0
blood
Life stage
5
unknown
Date released
3
September, 2022
2
February, 2021
Software used
2
encode-ccres
2
r
1
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR476YJE
released
Annotation file set
: Candidate regulatory elements for BSS01206 lung microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR502IOI
released
Annotation file set
: Target gene predictions for BSS01206 lung microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR052EZN
released
Annotation file set
: Chromatin states for BSS01206 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR724PTV
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE lung microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR948MMS
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE lung microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP