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Citing CMDGA
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Annotation type
3
accessible chromatin
2
gene expression
1
caQTL
1
eQTL
1
target gene predictions
Annotation Category
2
Gene expression levels
Annotation type Category
1
RNA-seq
1
snRNA-seq
Available data
1
tsv
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
2
skeletal muscle fiber
2
skeletal muscle satellite cell
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
gastrocnemius medialis(Muscle - Skeletal)
1
left ventricle myocardium
1
skeletal muscle tissue
1
type I muscle cell
1
type II muscle cell
1
whole blood
Organ
2
musculature of body
1
esophagus
0
blood
Life stage
1
adult
Date released
1
February, 2024
1
March, 2024
Software used
2
r
1
deeptools
1
samtools
1
umitools
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
1
AMP
1
AMP2
Showing 2 of 2 results
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Download
FileSet
DSR852SKA
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Esophagus - Muscularis.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR928HZI
released
Annotation file set
: Cell type gene expression mean TPM and bw of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP