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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
18
coronary artery
18
endothelial cell of umbilical vein
16
tibial artery
15
ascending aorta
13
aorta
10
dermis blood vessel endothelial cell
10
endothelial cell of hepatic sinusoid
10
thoracic aorta
7
fibroblast of pulmonary artery
6
pulmonary artery endothelial cell
6
smooth muscle cell of the coronary artery
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Glomerular Capillary Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
fibroblast of the aortic adventitia
4
brain microvascular endothelial cell
4
kidney capillary endothelial cell
4
pancreatic endothelial cell
2
aortic endothelial cell
2
endothelial cell of coronary artery
2
vein endothelial cell
1
brain microvascular endothelial cell
1
abdominal aorta artery
1
aorta wall
1
aortic smooth muscle cell
1
circle of Willis
1
whole blood
Organ
4
blood vessel
4
brain
4
epithelium
4
vasculature
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
accessible chromatin
Showing 4 of 4 results
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Download
FileSet
DSR205TDH
released
Annotation file set
: Candidate regulatory elements for BSS00143 brain microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR658UET
released
Annotation file set
: Target gene predictions for BSS00143 brain microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR909RVE
released
Annotation file set
: Chromatin states for BSS00143 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR636KAE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP