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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
9
candidate regulatory elements
8
chromatin state
7
target gene predictions
5
accessible chromatin
3
Fine-mapped variants
3
variant allelic effects
binding sites
2
eQTL
1
caQTL
1
gene expression
Annotation Category
7
Target gene links
Annotation type Category
6
DNase-seq
4
ChIP-seq
2
ATAC-seq
2
H3K27ac ChIP-Seq
1
HiC
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
4
primary cell
3
tissue
Biosample term
4
aorta
4
endothelial cell of umbilical vein
3
coronary artery
2
ascending aorta
2
dermis blood vessel endothelial cell
2
thoracic aorta
2
tibial artery
1
brain microvascular endothelial cell
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
pulmonary artery endothelial cell
1
smooth muscle cell of the coronary artery
Organ
7
blood vessel
7
vasculature
4
epithelium
4
vein
3
artery
3
heart
Life stage
2
adult
2
newborn
Date released
4
September, 2022
2
May, 2021
1
March, 2020
Software used
4
r
2
abc
1
hiccups
Lab
5
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
annotation_type!
binding sites
Showing 7 of 7 results
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FileSet
DSR936NVU
released
Annotation file set
: Target gene predictions for BSS00298 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR099GIV
released
Annotation file set
: Target gene predictions for BSS00296 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR422SRD
released
Annotation file set
: Target gene predictions for BSS00243 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR035MSO
released
Annotation file set
: Target gene predictions for BSS00242 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR784TGC
released
Annotation file set
: enhancer-gene predicton of endothelial_cell_of_umbilical_vein-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR233ZIX
released
Annotation file set
: enhancer-gene predicton of coronary_artery-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP