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Schema
Citing CMDGA
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Annotation type
4
accessible chromatin
4
candidate regulatory elements
4
target gene predictions
3
Fine-mapped variants
3
chromatin state
3
variant allelic effects
2
eQTL
1
caQTL
1
gene expression
Annotation Category
4
Target gene links
Annotation type Category
4
DNase-seq
3
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Biosample term
4
aorta
4
endothelial cell of umbilical vein
3
coronary artery
2
ascending aorta
2
dermis blood vessel endothelial cell
2
thoracic aorta
2
tibial artery
1
brain microvascular endothelial cell
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
pulmonary artery endothelial cell
1
smooth muscle cell of the coronary artery
Organ
4
blood vessel
4
vasculature
3
artery
3
heart
1
epithelium
1
kidney
Life stage
2
adult
1
embryonic
Date released
3
September, 2022
1
May, 2021
Software used
3
r
1
abc
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
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FileSet
DSR668BHK
released
Annotation file set
: Target gene predictions for BSS01077 kidney capillary endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR422SRD
released
Annotation file set
: Target gene predictions for BSS00243 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR035MSO
released
Annotation file set
: Target gene predictions for BSS00242 coronary artery from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR233ZIX
released
Annotation file set
: enhancer-gene predicton of coronary_artery-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP