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Citing CMDGA
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Annotation type
6
candidate regulatory elements
4
target gene predictions
3
chromatin state
2
accessible chromatin
2
binding sites
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
4
bed bed9
bigBed bed9
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
endothelial cell of umbilical vein
2
aorta
2
ascending aorta
2
coronary artery
2
dermis blood vessel endothelial cell
2
thoracic aorta
2
tibial artery
1
brain microvascular endothelial cell
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
pulmonary artery endothelial cell
Organ
3
blood vessel
3
epithelium
3
vasculature
3
vein
Life stage
2
newborn
Date released
2
September, 2022
1
August, 2017
Software used
3
chromhmm
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
files.file_type!
bigBed bed9
Showing 3 of 3 results
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FileSet
DSR660JUZ
released
Annotation file set
: Chromatin states for BSS00298 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR550HDB
released
Annotation file set
: Chromatin states for BSS00296 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR000759
released
Annotation file set
: ChromHMM 13-state model for endothelial cell of umbilical vein
Lab:
Stephen Parker, UMich
Project:
AMP