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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
2
histone modifications
1
accessible chromatin
1
caQTL
1
target gene predictions
Annotation Category
5
cis-regulatory elements
1
Genetic variant effects
1
Target gene links
Annotation type Category
4
ChIP-seq
2
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
1
snATAC-seq
Available data
7
bed bed3+
1
bigWig
1
tsv
File set status
7
released
Genome assembly (visualization)
6
hg19
2
GRCh38
Organism
7
Homo sapiens
Biosample type
5
cell line
2
primary cell
Biosample term
15
endothelial cell of umbilical vein
12
coronary artery
12
endothelial cell of hepatic sinusoid
10
tibial artery
8
aorta
8
ascending aorta
8
dermis blood vessel endothelial cell
8
thoracic aorta
7
fibroblast of pulmonary artery
6
pulmonary artery endothelial cell
5
smooth muscle cell of the coronary artery
4
aortic endothelial cell
4
brain microvascular endothelial cell
4
fibroblast of the aortic adventitia
3
kidney capillary endothelial cell
2
capillary endothelial cell
2
vein endothelial cell
1
brain microvascular endothelial cell
1
aortic smooth muscle cell
1
circle of Willis
1
endothelial cell of coronary artery
1
placental villus capillary endothelial cell
Organ
7
blood vessel
7
vasculature
5
artery
5
heart
2
epithelium
2
vein
Life stage
1
unknown
Date released
5
February, 2021
1
February, 2023
1
May, 2021
Software used
5
macs
1
abc
1
rasqual
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
Showing 7 of 7 results
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FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR442EVO
released
Annotation file set
: Accessible chromatin of smooth muscle cell of the coronary artery from GSE113348 ATAC-seq cell lines
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR118QJN
released
Annotation file set
: Histone modifications annotation for Uterus TIVE-LTC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR951OND
released
Annotation file set
: Histone modifications annotation for Cardiovascular HCASMC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR391OTB
released
Annotation file set
: Binding sites annotation for Uterus TIVE-LTC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR898IID
released
Annotation file set
: Binding sites annotation for Cardiovascular HCASMC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR886XYE
released
Annotation file set
: enhancer-gene predicton of coronary_artery_smooth_muscle_cell-Miller2016 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP