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Schema
Citing CMDGA
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Annotation type
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
32
adipose tissue
32
fibroblast
27
adipocyte
22
pericyte cell
21
coronary artery
21
subcutaneous adipose tissue
20
endothelial cell of umbilical vein
19
foreskin fibroblast
19
mesenchymal stem cell
19
tibial artery
18
omental fat pad
17
fibroblast of cardiac tissue
17
osteoblast
16
ascending aorta
16
endothelial cell of hepatic sinusoid
16
fibroblast of lung
13
aorta
12
fibroblast of dermis
12
skin fibroblast
11
hepatic stellate cell
11
thoracic aorta
10
dermis blood vessel endothelial cell
10
pancreatic stellate cell
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
7
GM23248
7
chondrocyte
7
mesangial cell
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
6
subcutaneous abdominal adipose tissue
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Mesangial Cell
5
Peritubular Capillary Endothelial Cell
5
brain microvascular endothelial cell
5
cardiac fibroblast
5
cartilage tissue
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
5
kidney capillary endothelial cell
4
HT1080
4
adult endothelial progenitor cell
4
aortic endothelial cell
4
bone tissue
4
brain pericyte
4
fibroblast of gingiva
4
pancreatic endothelial cell
4
preadipocyte
4
stromal cell of bone marrow
4
visceral abdominal adipose tissue
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
2
adipose tissue derived mesenchymal stem cell
2
capillary endothelial cell
2
columnar chondrocyte
2
endothelial cell of coronary artery
2
extracellular matrix secreting cell
2
fat cell
2
luteal cell
2
stromal cell
2
vein endothelial cell
1
brain microvascular endothelial cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
abdominal aorta artery
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
aorta wall
1
aortic smooth muscle cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
circle of Willis
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
placental villus capillary endothelial cell
1
quiescent pancreatic stellate cell
1
white adipose cell
1
white adipose tissue
1
whole blood
Organ
1
connective tissue
0
blood vessel
Date released
1
May, 2020
Software used
1
deltasvm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
Showing 1 of 1 results
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Download
FileSet
DSR125CCG
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose SGBS ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP