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Schema
Citing CMDGA
Clear Filters
Annotation type
39
target gene predictions
8
gene expression
2
binding sites
2
chromatin state
1
accessible chromatin
1
candidate regulatory elements
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
cell line
1
stem cell
Biosample term
14
trophoblast cell
12
chorionic villus
11
endothelial cell of umbilical vein
8
H9
8
aorta
8
dermis blood vessel endothelial cell
7
ascending aorta
7
thoracic aorta
6
coronary artery
6
endodermal cell
6
tibial artery
6
trophoblast
5
mesodermal cell
3
ELF-1
3
H1-hESC
3
H4
3
HUES48
3
HUES6
3
HUES64
3
UCSF-4
3
brain microvascular endothelial cell
3
ectodermal cell
3
fibroblast of pulmonary artery
3
fibroblast of the aortic adventitia
3
pulmonary artery endothelial cell
2
ES-I3
2
H7-hESC
2
cardiac mesoderm primordium
2
embryonic facial prominence
2
kidney capillary endothelial cell
1
H1
1
H7
Organ
3
embryo
0
blood vessel
Life stage
3
embryonic
Date released
2
September, 2022
1
August, 2017
Software used
2
chromhmm
1
r
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR002BRL
released
Annotation file set
: Chromatin states for BSS00478 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP