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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
6
DNase-seq
4
ChIP-seq
3
snDropSeq
1
ATAC-seq
1
RNA-seq
1
scRNA-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
62
kidney
40
right kidney
38
renal cortex interstitium
37
renal pelvis
36
left kidney
15
endothelial cell of umbilical vein
10
aorta
10
dermis blood vessel endothelial cell
10
left renal cortex interstitium
10
left renal pelvis
10
right renal pelvis
9
ascending aorta
9
right renal cortex interstitium
9
thoracic aorta
8
HEK293
8
coronary artery
8
tibial artery
7
fibroblast of pulmonary artery
7
kidney tubule cell
6
endothelial cell of hepatic sinusoid
6
pulmonary artery endothelial cell
5
epithelial cell of proximal tubule
4
ACHN
4
Caki2
4
G401
4
RCC 7860
4
brain microvascular endothelial cell
4
fibroblast of the aortic adventitia
4
glomerular endothelial cell
4
glomerular visceral epithelial cell
4
kidney epithelial cell
4
kidney glomerular epithelial cell
4
renal cell carcinoma
4
renal cortical epithelial cell
3
HEK293T
3
kidney capillary endothelial cell
2
aortic endothelial cell
2
cortex of kidney
2
kidney epithelium
2
smooth muscle cell of the coronary artery
2
vein endothelial cell
1
RCC
1
aortic smooth muscle cell
1
circle of Willis
1
endothelial cell of coronary artery
1
renal connecting tubule
Organ
4
epithelium
4
kidney
0
blood vessel
Life stage
3
child
1
young adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR003INP
released
Annotation file set
: Candidate regulatory elements for BSS00389 glomerular visceral epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR691IPC
released
Annotation file set
: Target gene predictions for BSS00389 glomerular visceral epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR420PUK
released
Annotation file set
: Chromatin states for BSS00389 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR236ODB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE glomerular visceral epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP