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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
22
foreskin keratinocyte
21
coronary artery
21
keratinocyte
20
endothelial cell of umbilical vein
19
foreskin fibroblast
19
tibial artery
16
ascending aorta
16
endothelial cell of hepatic sinusoid
13
aorta
12
fibroblast of dermis
12
skin fibroblast
11
thoracic aorta
10
dermis blood vessel endothelial cell
10
lower leg skin
8
dermis lymphatic vessel endothelial cell
8
fibroblast of pulmonary artery
7
GM23248
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
6
iPS DF 4.7 Cell Line
6
skin of body
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Glomerular Capillary Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
RPMI7951
5
SK-MEL-5
5
brain microvascular endothelial cell
5
fibroblast of the aortic adventitia
5
iPS DF 19.11
5
kidney capillary endothelial cell
4
aortic endothelial cell
4
dermis microvascular lymphatic vessel endothelial cell
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
4
pancreatic endothelial cell
3
COLO829
3
epidermal melanocyte
3
suprapubic skin
2
basal cell of epidermis
2
capillary endothelial cell
2
endothelial cell of coronary artery
2
granular cell of epidermis
2
skin of forearm
2
skin of prepuce of penis
2
vein endothelial cell
1
brain microvascular endothelial cell
1
BJ
1
HGPS cell
1
abdominal aorta artery
1
aorta wall
1
aortic smooth muscle cell
1
circle of Willis
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
iPS DF 4.7
1
placental villus capillary endothelial cell
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
whole blood
Disease term
3
melanoma
Organ
5
skin of body
0
blood vessel
Life stage
4
adult
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR319EDV
released
Annotation file set
: Candidate regulatory elements for BSS01536 RPMI7951 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR395YGG
released
Annotation file set
: Target gene predictions for BSS01536 RPMI7951 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR011XDK
released
Annotation file set
: Chromatin states for BSS01536 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR991XXY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE RPMI7951
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR752EOW
released
Annotation file set
: Accessible chromatin annotation for Epidermis RPMI-7951 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP