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Schema
Citing CMDGA
Clear Filters
Annotation type
46
binding sites
38
target gene predictions
25
histone modifications
13
candidate regulatory elements
12
accessible chromatin
7
chromatin state
Annotation Category
7
cis-regulatory elements
Annotation type Category
7
ChIP-seq
Available data
6
bed bed9
1
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
6
GRCh38
Organism
7
Homo sapiens
Biosample type
7
cell line
Biosample term
2
NAMALWA cell
1
CMK
1
GM06990
1
GM12891
1
GM12892
1
K562
Disease term
2
Burkitt lymphoma
1
Philadelphia-positive myelogenous leukemia
Organ
67
kidney
56
musculature of body
47
lung
40
epithelium
37
heart
36
brain
36
limb
33
extraembryonic component
32
intestine
31
connective tissue
27
embryo
22
skin of body
18
large intestine
16
placenta
16
vasculature
15
stomach
14
small intestine
13
ureter
11
blood vessel
11
thymus
10
penis
9
eye
8
adrenal gland
8
bone element
8
liver
8
spinal cord
7
blood
7
bodily fluid
6
pancreas
5
vein
4
lymph node
4
prostate gland
3
gonad
3
mammary gland
3
mouth
3
skeleton
2
adipose tissue
2
artery
2
bone marrow
2
bronchus
2
lymphatic vessel
2
lymphoid tissue
2
spleen
2
testis
2
tongue
1
esophagus
1
ovary
1
urinary bladder
Life stage
adult
3
child
3
unknown
Date released
6
September, 2022
1
August, 2017
Software used
7
chromhmm
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
RFA
7
AMP
relevant_life_stage!
adult
Showing 7 of 7 results
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FileSet
DSR694OZF
released
Annotation file set
: Chromatin states for BSS00221 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR810LZI
released
Annotation file set
: Chromatin states for BSS00454 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR222GWM
released
Annotation file set
: Chromatin states for BSS00452 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR947XYI
released
Annotation file set
: Chromatin states for BSS00395 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR057SQN
released
Annotation file set
: Chromatin states for BSS01351 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR334GJN
released
Annotation file set
: Chromatin states for BSS01350 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR418295
released
Annotation file set
: ChromHMM 13-state model for for human K562
Lab:
Stephen Parker, UMich
Project:
AMP