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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
4
target gene predictions
3
accessible chromatin
3
chromatin state
1
binding sites
1
caQTL
1
eQTL
1
gene expression
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
1
bigBed bed9
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
Biosample term
7
K562
6
adipocyte
6
adipose tissue
4
fibroblast of lung
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
mesenchymal stem cell
2
GM12878
2
NAMALWA cell
2
foreskin fibroblast
2
omental fat pad
2
skin fibroblast
1
CMK
1
DOHH2
1
GM06990
1
GM12875
1
GM12891
1
GM12892
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
HAP-1
1
HL-60
1
HT1080
1
KBM-7
1
NB4
1
OCI-LY7
1
RPMI8226
1
SU-DHL-6
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
hepatic stellate cell
1
osteoblast
1
pericyte cell
1
stromal cell of bone marrow
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
Organ
3
connective tissue
0
bodily fluid
Life stage
2
adult
1
embryonic
Date released
2
September, 2022
1
October, 2019
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR073XBJ
released
Annotation file set
: Chromatin states for BSS01261 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR625MZJ
released
Annotation file set
: Chromatin states for BSS01260 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR139NCZ
released
Annotation file set
: ChromHMM 15-state model for Mesenchymal Stem Cell from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP