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Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
3
HS-27A
3
HS-5
3
KMS-11
3
L1-S8
3
MG63
3
NCI-H929
3
OCI-LY1
3
OCI-LY3
3
SJSA1
3
femur
3
stromal cell of bone marrow
2
L1-S8R
2
arm bone
2
leg bone
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
Disease term
2
osteosarcoma
Organ
3
bone element
Life stage
2
child
1
young adult
Date released
2
September, 2022
1
February, 2021
Software used
1
chromhmm
1
encode-ccres
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR401QAB
released
Annotation file set
: Candidate regulatory elements for BSS01267 MG63 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR048KGB
released
Annotation file set
: Chromatin states for BSS01267 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR585UIG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE MG63
Lab:
AMP-T2D consortium
Project:
AMP