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Citing CMDGA
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Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
4
L1-S8
4
L1-S8R
4
MG63
4
SJSA1
3
HS-27A
3
HS-5
3
KMS-11
3
NCI-H929
3
OCI-LY1
3
OCI-LY3
3
arm bone
3
femur
3
leg bone
2
U2OS
Disease term
3
osteosarcoma
Organ
4
bone element
Life stage
3
adult
Date released
3
September, 2022
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_type!
primary cell
month_released!
February, 2021
Showing 4 of 4 results
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Download
FileSet
DSR499PBK
released
Annotation file set
: Candidate regulatory elements for BSS01550 SJSA1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR544XUG
released
Annotation file set
: Target gene predictions for BSS01550 SJSA1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR039SIU
released
Annotation file set
: Chromatin states for BSS01550 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR508VND
released
Annotation file set
: Accessible chromatin annotation for Bone SJSA-1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP