Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
10
Peyer's patch
5
GM18507
4
L1-S8
4
L1-S8R
4
MG63
4
SJSA1
4
megakaryocyte
3
HS-27A
3
HS-5
3
KMS-11
3
NCI-H929
3
OCI-LY1
3
OCI-LY3
3
arm bone
3
femur
3
germinal center
3
leg bone
3
stromal cell of bone marrow
2
U2OS
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
small intestine - terminal Ileum
Disease term
3
osteosarcoma
Organ
4
bone element
0
lymphoid tissue
Life stage
3
child
Date released
February, 2021
3
September, 2022
1
June, 2020
Software used
2
r
1
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
February, 2021
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR401QAB
released
Annotation file set
: Candidate regulatory elements for BSS01267 MG63 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR428DAS
released
Annotation file set
: Target gene predictions for BSS01267 MG63 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR048KGB
released
Annotation file set
: Chromatin states for BSS01267 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR791ADX
released
Annotation file set
: Accessible chromatin annotation for Bone MG-63 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP