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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
15
testis
4
HS-27A
4
HS-5
4
KMS-11
4
L1-S8
4
MG63
4
NCI-H929
4
NT2-D1 cell
4
OCI-LY1
4
OCI-LY3
4
SJSA1
4
bone tissue
4
femur
4
stromal cell of bone marrow
3
L1-S8R
3
arm bone
3
leg bone
2
megakaryocyte
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
Leydig cell
1
NT2/D1
1
U2OS
Disease term
3
osteosarcoma
Organ
4
bone element
0
testis
Life stage
3
child
1
young adult
Date released
3
September, 2022
1
February, 2021
Software used
macs
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
software_used.software.name!
macs
Showing 4 of 4 results
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Download
FileSet
DSR401QAB
released
Annotation file set
: Candidate regulatory elements for BSS01267 MG63 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR428DAS
released
Annotation file set
: Target gene predictions for BSS01267 MG63 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR048KGB
released
Annotation file set
: Chromatin states for BSS01267 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR585UIG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE MG63
Lab:
AMP-T2D consortium
Project:
AMP