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Schema
Citing CMDGA
Clear Filters
Annotation type
4
binding sites
3
accessible chromatin
3
candidate regulatory elements
2
chromatin state
2
histone modifications
2
target gene predictions
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
2
bed bed3+
2
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
3
cell line
1
primary cell
Biosample term
21
brain
6
temporal lobe
5
caudate nucleus
5
layer of hippocampus
4
angular gyrus
4
substantia nigra
3
SK-N-DZ
3
cerebellum
3
cingulate gyrus
2
BE(2)-C
2
Brodmann (1909) area 46
2
SK-N-MC
2
SK-N-SH
2
choroid plexus epithelial cell
2
frontal cortex
2
globus pallidus
2
midbrain
2
putamen
1
A172
1
Ammon's horn
1
Brodmann (1909) area 9
1
Daoy
1
H54
1
M059J
1
U-87 MG
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
bed nucleus of stria terminalis
1
brain microvascular endothelial cell
1
cerebellar cortex
1
claustrum of brain
1
dentate nucleus
1
dorsal lateral geniculate nucleus
1
dura mater
1
entorhinal cortex
1
frontal pole
1
hypothalamus
1
inferior parietal cortex
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulla oblongata
1
medulloblastoma
1
mid-frontal lobe
1
middle frontal gyrus
1
myelencephalon
1
nucleus accumbens
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pons
1
pontine tegmentum
1
precentral gyrus
1
prefrontal cortex
1
pulvinar nucleus
1
raphe nuclei
1
red nucleus
1
septal nuclear complex
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
Disease term
1
neuroblastoma
Organ
4
brain
2
epithelium
2
vasculature
Life stage
1
child
1
unknown
Date released
2
February, 2021
2
September, 2022
Software used
2
chromhmm
2
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR703VXR
released
Annotation file set
: Chromatin states for BSS00102 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR525PVH
released
Annotation file set
: Chromatin states for BSS00218 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR023RXU
released
Annotation file set
: Histone modifications annotation for Neural HCPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR273HED
released
Annotation file set
: Histone modifications annotation for Neural BEBRACKETL2BRACKETR-C from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP