Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
2
target gene predictions
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
histone modifications
Annotation Category
2
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
Capture-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
cell line
1
in vitro differentiated cells
Biosample term
45
brain
10
pituitary stalk
9
layer of hippocampus
8
caudate nucleus
7
SK-N-SH
7
substantia nigra
7
temporal lobe
6
SK-N-DZ
6
angular gyrus
6
cingulate gyrus
5
cerebellum
4
Ammon's horn
4
Brodmann (1909) area 46
4
frontal cortex
3
A172
3
Daoy
3
H54
3
M059J
3
SK-N-MC
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
brain microvascular endothelial cell
3
cerebellar cortex
3
choroid plexus epithelial cell
3
globus pallidus
3
middle frontal gyrus
3
putamen
2
BE(2)-C
2
inferior parietal cortex
2
medulla oblongata
2
medulloblastoma
2
midbrain
2
middle frontal area 46
2
pons
1
BE2C
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
brain pericyte
1
dorsolateral prefrontal cortex
1
undifferentiated ESC (H9 cell line)
Disease term
2
neuroblastoma
Organ
3
brain
Life stage
2
child
Date released
2
September, 2022
1
September, 2023
Software used
2
r
1
chicago
Lab
2
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Project
3
AMP
RFA
2
AMP
1
AMP2
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR383OMT
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Progenitor (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR384UZS
released
Annotation file set
: Candidate regulatory elements for BSS00102 BE(2)-C from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR343OTF
released
Annotation file set
: Target gene predictions for BSS00102 BE(2)-C from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP