Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
eQTL
1
variant allelic effects
Annotation Category
cis-regulatory elements
3
Genetic variant effects
Annotation type Category
2
RNA-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
10
pituitary stalk
7
putamen
6
caudate nucleus
6
frontal cortex
6
substantia nigra
5
Ammon's horn
5
amygdala
5
anterior cingulate cortex
5
cerebellum
5
cerebellum (Hemisphere)
5
hypothalamus
5
nucleus accumbens
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
brain
2
cardiac fibroblast
2
dorsolateral prefrontal cortex
1
brain microvascular endothelial cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
SK-N-SH
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
cerebellar hemisphere
1
choroid plexus epithelial cell
1
globus pallidus
1
layer of hippocampus
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
pituitary gland
1
pons
1
undifferentiated ESC (H9 cell line)
Organ
3
brain
Date released
2
January, 2022
1
May, 2020
Software used
r
2
qTLtools
1
deltasvm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_category!
cis-regulatory elements
software_used.software.name!
r
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154FEP
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP