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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
1
bigWig
File set status
2
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
21
brain
9
caudate nucleus
8
cerebellum
8
frontal cortex
8
putamen
8
substantia nigra
6
Ammon's horn
5
amygdala
5
anterior cingulate cortex
5
hypothalamus
5
nucleus accumbens
4
angular gyrus
4
cerebellum (Hemisphere)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
layer of hippocampus
4
temporal lobe
3
cardiac fibroblast
2
Brodmann (1909) area 46
2
SK-N-DZ
2
SK-N-SH
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
brain microvascular endothelial cell
2
cerebellar cortex
2
choroid plexus epithelial cell
2
cingulate gyrus
2
globus pallidus
2
medulla oblongata
2
midbrain
2
middle frontal gyrus
2
pons
1
A172
1
BE(2)-C
1
Daoy
1
H54
1
M059J
1
SK-N-MC
1
brain pericyte
1
cerebellar hemisphere
1
dorsolateral prefrontal cortex
1
hippocampal neuron
1
inferior parietal cortex
1
medulloblastoma
1
pituitary gland
Organ
2
blood vessel
2
brain
2
epithelium
2
vasculature
Life stage
1
unknown
Date released
1
January, 2020
1
September, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR909RVE
released
Annotation file set
: Chromatin states for BSS00143 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR491SOC
released
Annotation file set
: Accessible chromatin annotation of brain microvascular endothelial cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP